Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000003261annotation not available (549 aa)    
Predicted Functional Partners:
Map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.873
ENSMSIP00000008441
annotation not available
    
   0.755
Klk5
Kallikrein related-peptidase 5.
    
   0.747
Avl9
AVL9 cell migration associated.
      
 0.720
Fam45a
Family with sequence similarity 45, member A.
      
 0.717
Dennd6a
DENN/MADD domain containing 6A.
      
 0.716
Klk6
Kallikrein related-peptidase 6.
    
   0.583
Ighmbp2
Immunoglobulin mu binding protein 2.
      
 0.560
Nfxl1
Nuclear transcription factor, X-box binding-like 1.
   
  
 0.547
Pnkp
Polynucleotide kinase 3'- phosphatase.
   
  
 0.532
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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