Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000003280annotation not available (122 aa)    
Predicted Functional Partners:
Chac2
ChaC, cation transport regulator 2.
    
   0.712
Arih1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
   0.709
Selenot
Selenoprotein T.
      
 0.690
Selenos
Selenoprotein S.
      
 0.671
Selenoo
Selenoprotein O.
      
 0.667
Selenof
Selenoprotein F.
   
  
 0.666
Wdr82
WD repeat domain containing 82.
    
   0.663
Txnrd2
Thioredoxin reductase 2.
   
  
 0.591
Selenoi
Selenoprotein I.
      
 0.589
Selenom
Selenoprotein M.
      
 0.584
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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