Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NapbN-ethylmaleimide sensitive fusion protein attachment protein beta. (298 aa)    
Predicted Functional Partners:
Stx6
Syntaxin 6.
    
 0.989
Napg
N-ethylmaleimide sensitive fusion protein attachment protein gamma.
   
 0.987
Napa
N-ethylmaleimide sensitive fusion protein attachment protein alpha.
  
 
0.986
Vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.986
Stx18
Syntaxin 18.
    
 0.985
Stx3
Syntaxin 3.
    
 0.985
Stx5a
Syntaxin 5A.
    
 0.985
Stx16
Syntaxin 16.
    
 0.984
Gosr1
Golgi SNAP receptor complex member 1.
    
 0.983
Stx12
Syntaxin 12.
    
 0.981
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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