Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LssLanosterol synthase. (733 aa)    
Predicted Functional Partners:
Cyp51
Cytochrome P450, family 51.
 
 0.998
Sqle
Squalene epoxidase.
  
 
 0.986
Hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.978
ENSMSIP00000007785
annotation not available
 
 
 0.973
ENSMSIP00000016390
annotation not available
 
 
 0.970
Sc5d
sterol-C5-desaturase.
   
 0.968
ENSMSIP00000007493
annotation not available
 
 
 0.967
Dhcr24
24-dehydrocholesterol reductase.
   
 
 0.956
Cyp7b1
Cytochrome P450, family 7, subfamily b, polypeptide 1.
  
 0.951
Cyp8b1
Cytochrome P450, family 8, subfamily b, polypeptide 1.
  
 0.951
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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