Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cst9Cystatin 9. (137 aa)    
Predicted Functional Partners:
Kcmf1
Potassium channel modulatory factor 1.
    
   0.803
Ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
    
   0.776
Cst12
Cystatin 12.
   
  
 0.622
Lgmn
Legumain.
   
 
 0.612
Cst8
Cystatin 8 (cystatin-related epididymal spermatogenic).
   
  
 0.595
Gzf1
GDNF-inducible zinc finger protein 1.
      
 0.538
Vsig1
V-set and immunoglobulin domain containing 1.
      
 0.524
Defb19
Defensin beta 19.
   
  
 0.512
Cst11
Cystatin 11.
   
  
 0.481
Bpifa3
BPI fold containing family A, member 3.
   
  
 0.446
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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