STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zscan20Zinc finger and SCAN domains 20. (1024 aa)    
Predicted Functional Partners:
Zkscan5
Zinc finger with KRAB and SCAN domains 5.
  
  
0.813
ENSMSIP00000025967
annotation not available
  
 
  
0.806
Zfp213
Zinc finger protein 213.
  
 
  
0.800
Zscan21
Zinc finger and SCAN domain containing 21.
  
 
  
0.797
Pgbd1
piggyBac transposable element derived 1.
    
   0.795
Zscan29
Zinc finger SCAN domains 29.
  
 
  
0.795
Zbed5
Zinc finger, BED type containing 5.
    
   0.793
ENSMSIP00000034674
annotation not available
    
  
0.790
Zscan18
Zinc finger and SCAN domain containing 18.
    
  
0.788
Zbtb40
Zinc finger and BTB domain containing 40.
   
   
0.774
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.