Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Eif6Eukaryotic translation initiation factor 6. (245 aa)    
Predicted Functional Partners:
Gtpbp4
GTP binding protein 4.
   
 
 0.960
Nip7
NIP7, nucleolar pre-rRNA processing protein.
   
 
 0.956
Bccip
BRCA2 and CDKN1A interacting protein.
   
 
 0.941
ENSMSIP00000021625
annotation not available
  
 
 0.940
ENSMSIP00000038535
annotation not available
  
 
 0.940
Nsa2
NSA2 ribosome biogenesis homolog.
   
 
 0.938
ENSMSIP00000007608
annotation not available
  
 
 0.933
Wdr12
WD repeat domain 12.
   
 
 0.926
Nmd3
NMD3 ribosome export adaptor.
   
 
 0.921
Pa2g4
Proliferation-associated 2G4.
   
 
 0.920
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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