Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000003705annotation not available (179 aa)    
Predicted Functional Partners:
Ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.801
Galc
Galactosylceramidase.
     
 0.790
Cerk
Ceramide kinase.
     
 0.790
ENSMSIP00000001257
annotation not available
   
 
 0.773
Degs2
Delta(4)-desaturase, sphingolipid 2.
     
 0.768
Smpd2
Sphingomyelin phosphodiesterase 2, neutral.
     
 0.760
Smpd1
Sphingomyelin phosphodiesterase 1, acid lysosomal.
     
 0.759
Gal3st1
galactose-3-O-sulfotransferase 1.
     
 0.758
Asah1
N-acylsphingosine amidohydrolase 1.
     
 0.758
Acer1
Alkaline ceramidase 1.
     
 0.754
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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