Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000003752annotation not available (613 aa)    
Predicted Functional Partners:
4930544G11Rik
RIKEN cDNA 4930544G11 gene.
    
 0.690
Rhoc
Ras homolog family member C.
    
 0.690
Rhob
Ras homolog family member B.
    
 0.690
Rhoa
Ras homolog family member A.
    
 0.690
ENSMSIP00000035707
annotation not available
    
 0.690
Cdc42
Cell division cycle 42.
   
 0.644
Rnd1
Rho family GTPase 1.
    
 0.579
Rnd3
Rho family GTPase 3.
    
 0.579
Gtf2e2
General transcription factor II E, polypeptide 2 (beta subunit).
      
 0.524
Nemp1
Nuclear envelope integral membrane protein 1.
      
 0.522
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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