STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nob1NIN1/RPN12 binding protein 1 homolog. (414 aa)    
Predicted Functional Partners:
Riok2
RIO kinase 2.
   
 0.999
Ltv1
LTV1 ribosome biogenesis factor.
   
 0.999
Tsr1
TSR1 20S rRNA accumulation.
   
 0.999
Bysl
Bystin-like.
   
 0.999
Riok1
RIO kinase 1.
   
 0.998
Rrp12
Ribosomal RNA processing 12 homolog (S. cerevisiae).
   
 0.998
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
    
  0.998
Dimt1
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae).
   
 0.997
ENSMSIP00000000932
annotation not available
   
 0.997
ENSMSIP00000005139
annotation not available
   
 0.997
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.