Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Reep5Receptor accessory protein 5. (189 aa)    
Predicted Functional Partners:
Snx15
Sorting nexin 15.
    
   0.917
Lnpk
Lunapark, ER junction formation factor.
    
 
 0.831
Rtn2
Reticulon 2 (Z-band associated protein).
    
 
 0.828
Rtn3
Reticulon 3.
    
 
 0.819
Rtn4
Reticulon 4.
    
 
 0.819
Rtn1
Reticulon 1.
    
 
 0.819
Rabac1
Rab acceptor 1 (prenylated).
   
   0.767
Maea
Macrophage erythroblast attacher.
   
   0.682
Rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
    
   0.664
Reep2
Receptor accessory protein 2.
    
 
 0.636
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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