STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Reep5Receptor accessory protein 5. (189 aa)    
Predicted Functional Partners:
Snx15
Sorting nexin 15.
    
   0.867
Rtn2
Reticulon 2 (Z-band associated protein).
    
 
 0.679
Rtn3
Reticulon 3.
    
 
 0.679
Rtn4
Reticulon 4.
    
 
 0.679
Rtn1
Reticulon 1.
    
 
 0.679
ENSMSIP00000018596
annotation not available
   
 
 0.567
Lnpk
Lunapark, ER junction formation factor.
    
 
 0.541
Reep2
Receptor accessory protein 2.
    
 
0.443
Rhbdd3
Rhomboid domain containing 3.
      
 0.433
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.