STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pkd2l2Polycystic kidney disease 2-like 2. (621 aa)    
Predicted Functional Partners:
Pkdrej
Polycystin (PKD) family receptor for egg jelly.
    
0.964
ENSMSIP00000007355
annotation not available
    
 0.962
Pkd1l3
Polycystic kidney disease 1 like 3.
    
0.944
Pkd1l2
Polycystic kidney disease 1 like 2.
    
0.910
Exoc5
Exocyst complex component 5.
     
 0.733
Trrap
Transformation/transcription domain-associated protein.
    
  0.677
Rho
Rhodopsin.
     
 0.675
Supt3
SPT3, SAGA and STAGA complex component.
     
 0.675
ENSMSIP00000010880
annotation not available
     
 0.650
Exoc4
Exocyst complex component 4.
     
 0.628
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.