STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hectd1HECT domain E3 ubiquitin protein ligase 1. (2618 aa)    
Predicted Functional Partners:
Trip12
Thyroid hormone receptor interactor 12.
   
  
0.893
Ubr3
Ubiquitin protein ligase E3 component n-recognin 3.
   
  
 0.884
Zranb1
Zinc finger, RAN-binding domain containing 1.
    
 
 0.736
ENSMSIP00000020920
annotation not available
   
    0.708
Uba3
Ubiquitin-like modifier activating enzyme 3.
     
 0.702
Ubr2
Ubiquitin protein ligase E3 component n-recognin 2.
   
  
 0.700
Ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.658
Usp24
Ubiquitin specific peptidase 24.
   
   0.603
Birc6
Baculoviral IAP repeat-containing 6.
   
 
 0.596
Apc2
Adenomatosis polyposis coli 2.
  
 
 0.594
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.