STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam216bFamily with sequence similarity 216, member B. (138 aa)    
Predicted Functional Partners:
Tmem212
Transmembrane protein 212.
   
  
 0.697
Sntn
Sentan, cilia apical structure protein.
   
  
 0.666
ENSMSIP00000025105
annotation not available
   
  
 0.587
ENSMSIP00000035699
annotation not available
      
 0.581
Lrrc71
Leucine rich repeat containing 71.
   
  
 0.580
Morn5
MORN repeat containing 5.
   
  
 0.577
Ankrd66
Ankyrin repeat domain 66.
      
 0.548
Cfap161
Cilia and flagella associated protein 161.
   
    0.547
Cfap70
Cilia and flagella associated protein 70.
      
 0.535
Calhm2
Calcium homeostasis modulator family member 2.
      
 0.535
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.