STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eif1adEukaryotic translation initiation factor 1A domain containing. (173 aa)    
Predicted Functional Partners:
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
 
 0.983
Riok1
RIO kinase 1.
   
 
 0.927
Lrrc47
Leucine rich repeat containing 47.
   
 
 0.925
Riok3
RIO kinase 3.
   
 
 0.873
Nob1
NIN1/RPN12 binding protein 1 homolog.
   
 
 0.849
Farsb
phenylalanyl-tRNA synthetase, beta subunit.
   
 
 0.836
Rps5
Ribosomal protein S5.
   
   0.832
Wdr55
WD repeat domain 55.
   
    0.811
ENSMSIP00000000407
annotation not available
    
 
 0.800
ENSMSIP00000031886
annotation not available
    
 
 0.800
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.