STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004152annotation not available (153 aa)    
Predicted Functional Partners:
Trav19
T cell receptor alpha variable 19.
    
  0.732
H2-Ea-ps
Histocompatibility 2, class II antigen E alpha, pseudogene.
    
  0.659
H2-Oa
Histocompatibility 2, O region alpha locus.
    
  0.659
ENSMSIP00000004125
annotation not available
  
0.605
Ins2
Insulin II.
    
   0.541
Ins1
Insulin I.
    
   0.541
H2-Aa
Histocompatibility 2, class II antigen A, alpha.
    
  0.505
ENSMSIP00000012321
annotation not available
    
  0.497
H2-Eb1
Histocompatibility 2, class II antigen E beta.
    
  0.497
ENSMSIP00000012470
annotation not available
    
  0.497
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.