Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
XylbXylulokinase homolog (H. influenzae). (551 aa)    
Predicted Functional Partners:
Rpe
Ribulose-5-phosphate-3-epimerase.
   
 0.966
Sord
Sorbitol dehydrogenase.
  
 
 0.953
Agl
Amylo-1,6-glucosidase, 4-alpha-glucanotransferase.
  
   0.898
Gpd2
Glycerol phosphate dehydrogenase 2, mitochondrial.
  
 
 0.889
Fuom
Fucose mutarotase.
  
 
 0.881
Rpia
Ribose 5-phosphate isomerase A.
    
 0.870
ENSMSIP00000006938
annotation not available
  
 
 0.856
Add2
Adducin 2 (beta).
  
 
 0.856
Add1
Adducin 1 (alpha).
  
 
 0.856
Add3
Adducin 3 (gamma).
  
 
 0.856
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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