STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004402annotation not available (120 aa)    
Predicted Functional Partners:
Dnajc13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.546
Atp13a2
ATPase type 13A2.
    
 
 0.538
Rab39b
RAB39B, member RAS oncogene family.
      
 0.532
Chchd2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
      
 0.531
Vps13c
Vacuolar protein sorting 13C.
      
 0.525
Synj1
Synaptojanin 1.
      
 0.523
Vps35
VPS35 retromer complex component.
      
 0.482
Ptrhd1
peptidyl-tRNA hydrolase domain containing 1.
      
 0.455
Gigyf2
GRB10 interacting GYF protein 2.
      
 0.453
Dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
      
 0.445
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.