Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Taf6TATA-box binding protein associated factor 6. (678 aa)    
Predicted Functional Partners:
Taf2
TATA-box binding protein associated factor 2.
    
 0.999
Taf11
TATA-box binding protein associated factor 11.
    
 0.999
ENSMSIP00000010880
annotation not available
   
 0.999
ENSMSIP00000018780
annotation not available
    
 0.999
Taf3
TATA-box binding protein associated factor 3.
    
 0.999
Taf10
TATA-box binding protein associated factor 10.
    
 0.999
Taf5
TATA-box binding protein associated factor 5.
   
 0.999
Taf8
TATA-box binding protein associated factor 8.
    
 0.999
Taf4b
TATA-box binding protein associated factor 4b.
    
 0.998
ENSMSIP00000016623
annotation not available
    
 0.998
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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