Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Matn3Matrilin 3. (481 aa)    
Predicted Functional Partners:
Pdia4
Protein disulfide isomerase associated 4.
    
 0.856
Lum
Lumican.
   
 0.830
Comp
Cartilage oligomeric matrix protein.
   
 0.809
Pbld2
Phenazine biosynthesis-like protein domain containing 2.
    
   0.804
Frzb
Frizzled-related protein.
    
 
 0.780
Fam20c
Family with sequence similarity 20, member C.
    
  0.726
Col9a3
Collagen, type IX, alpha 3.
   
 0.723
Pcsk4
Proprotein convertase subtilisin/kexin type 4.
   
 0.719
Furin
Furin (paired basic amino acid cleaving enzyme).
   
 0.719
Col9a2
Collagen, type IX, alpha 2.
   
 0.715
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.