Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004451annotation not available (721 aa)    
Predicted Functional Partners:
Brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.901
Abraxas1
BRCA1 A complex subunit.
    
 0.900
Babam1
BRISC and BRCA1 A complex member 1.
    
 0.897
Babam2
BRISC and BRCA1 A complex member 2.
    
 0.894
Brca1
Breast cancer 1, early onset.
    
 0.832
Bard1
BRCA1 associated RING domain 1.
    
 0.830
Mdc1
Mediator of DNA damage checkpoint 1.
    
 0.680
Paxip1
PAX interacting (with transcription-activation domain) protein 1.
    
 0.680
ENSMSIP00000020352
annotation not available
     
 0.648
ENSMSIP00000020569
annotation not available
    
  0.643
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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