STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc26a4Solute carrier family 26, member 4. (780 aa)    
Predicted Functional Partners:
Mre11a
MRE11A homolog A, double strand break repair nuclease.
  
  0.907
ENSMSIP00000020454
annotation not available
    
 0.831
ENSMSIP00000026455
annotation not available
    
 0.831
Slc4a1
Solute carrier family 4 (anion exchanger), member 1.
     
 0.753
Slc4a2
Solute carrier family 4 (anion exchanger), member 2.
     
 0.706
Kcnj10
Potassium inwardly-rectifying channel, subfamily J, member 10.
   
  
 0.688
Slc4a8
Solute carrier family 4 (anion exchanger), member 8.
     
 0.677
Gjb2
Gap junction protein, beta 2.
      
 0.671
Cftr
Cystic fibrosis transmembrane conductance regulator.
    
 
 0.660
Slc4a4
Solute carrier family 4 (anion exchanger), member 4.
     
 0.649
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.