STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004480annotation not available (90 aa)    
Predicted Functional Partners:
ENSMSIP00000009114
annotation not available
   
 0.971
Uty
Ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome.
   
 0.971
Kdm6a
Lysine (K)-specific demethylase 6A.
   
 0.971
Kdm6b
KDM1 lysine (K)-specific demethylase 6B.
   
 0.971
Rbbp5
Retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.957
Ash2l
ASH2 like histone lysine methyltransferase complex subunit.
    
 0.957
Dpy30
Dpy-30, histone methyltransferase complex regulatory subunit.
   
 0.849
ENSMSIP00000000530
annotation not available
    
 0.833
Prkab1
Protein kinase, AMP-activated, beta 1 non-catalytic subunit.
    
  0.825
Prkab2
Protein kinase, AMP-activated, beta 2 non-catalytic subunit.
    
  0.825
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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