STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abcb8ATP-binding cassette, sub-family B (MDR/TAP), member 8. (717 aa)    
Predicted Functional Partners:
Ccdc51
Coiled-coil domain containing 51.
    
 0.976
Tapbp
TAP binding protein.
   
 0.922
Abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.843
Kcnj1
Potassium inwardly-rectifying channel, subfamily J, member 1.
   
 0.707
Rpa2
Replication protein A2.
   
 0.698
B2m
Beta-2 microglobulin.
   
 0.698
ENSMSIP00000022070
annotation not available
  
 0.681
Mcu
Mitochondrial calcium uniporter.
      
 0.623
Hfe
Homeostatic iron regulator.
    
 0.618
Calr3
Calreticulin 3.
   
 0.609
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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