Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sycp2lSynaptonemal complex protein 2-like. (825 aa)    
Predicted Functional Partners:
Sycp1
Synaptonemal complex protein 1.
   
 0.956
Syce2
Synaptonemal complex central element protein 2.
    
 0.921
Syce1
Synaptonemal complex central element protein 1.
    
 0.908
Tex12
Testis expressed 12.
    
 0.905
Syce3
Synaptonemal complex central element protein 3.
    
 0.898
ENSMSIP00000002059
annotation not available
    
 0.800
1700013H16Rik
RIKEN cDNA 1700013H16 gene.
    
 0.800
ENSMSIP00000025218
annotation not available
    
 0.800
Sycp3
Synaptonemal complex protein 3.
    
 0.800
ENSMSIP00000023527
annotation not available
      
 0.685
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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