Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004535annotation not available (204 aa)    
Predicted Functional Partners:
Rasef
RAS and EF hand domain containing.
      
 0.622
Tle1
Transducin-like enhancer of split 1.
      
 0.618
Psat1
Phosphoserine aminotransferase 1.
      
 0.617
ENSMSIP00000037621
annotation not available
    
 0.597
ENSMSIP00000037640
annotation not available
    
 0.597
Ube3a
Ubiquitin protein ligase E3A.
    
 
 0.582
ENSMSIP00000018041
annotation not available
      
 0.525
Snrpn
Small nuclear ribonucleoprotein N.
      
 0.525
Enox1
ecto-NOX disulfide-thiol exchanger 1.
      
 0.497
Arid3c
AT rich interactive domain 3C (BRIGHT-like).
      
 0.493
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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