STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Npc2NPC intracellular cholesterol transporter 2. (150 aa)    
Predicted Functional Partners:
ENSMSIP00000016179
annotation not available
    
 0.998
Npc1l1
NPC1 like intracellular cholesterol transporter 1.
    
 0.978
Scap
SREBF chaperone.
    
 0.962
Apob
Apolipoprotein B.
     
 0.769
Gm10267
Predicted gene 10267.
     
 0.761
Gm2a
GM2 ganglioside activator protein.
   
  
 0.712
Rest
RE1-silencing transcription factor.
      
 0.615
Eddm3b
Epididymal protein 3B.
      
 0.604
Negr1
Neuronal growth regulator 1.
    
 
 0.592
Lamp1
Lysosomal-associated membrane protein 1.
   
  
 0.576
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.