STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snapc5Small nuclear RNA activating complex, polypeptide 5. (98 aa)    
Predicted Functional Partners:
Snapc1
Small nuclear RNA activating complex, polypeptide 1.
    
 0.997
Snapc4
Small nuclear RNA activating complex, polypeptide 4.
    
 0.996
Snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
 0.994
Snapc2
Small nuclear RNA activating complex, polypeptide 2.
     
 0.969
Gtf2b
General transcription factor IIB.
    
 0.954
Tbp
TATA box binding protein.
    
 0.939
Gtf2a2
General transcription factor II A, 2.
    
  0.936
ENSMSIP00000000318
annotation not available
    
  0.914
Gtf2a1
General transcription factor II A, 1.
    
  0.914
Tbpl2
TATA box binding protein like 2.
    
 0.897
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.