STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asic3Acid-sensing (proton-gated) ion channel 3. (530 aa)    
Predicted Functional Partners:
Asic4
Acid-sensing (proton-gated) ion channel family member 4.
  
  
0.885
Scn11a
Sodium channel, voltage-gated, type XI, alpha.
     
 0.841
Stoml3
Stomatin (Epb7.2)-like 3.
    
 0.834
Stom
Stomatin.
    
 0.831
Asic5
Acid-sensing (proton-gated) ion channel family member 5.
    
0.753
Stoml1
Stomatin-like 1.
    
 0.751
ENSMSIP00000008017
annotation not available
  
 
0.730
ENSMSIP00000004168
annotation not available
    
0.726
Scn2b
Sodium channel, voltage-gated, type II, beta.
     
 0.724
Scn3b
Sodium channel, voltage-gated, type III, beta.
     
 0.720
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.