STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnrc2Proline-rich nuclear receptor coactivator 2. (140 aa)    
Predicted Functional Partners:
Dcp1a
Decapping mRNA 1A.
    
 0.973
Dcp1b
Decapping mRNA 1B.
    
 0.945
Dcp2
Decapping mRNA 2.
    
 
 0.856
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast).
    
 0.824
Smg9
Smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans).
     
 0.813
Smg8
Smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans).
     
 0.813
Upf2
UPF2 regulator of nonsense transcripts homolog (yeast).
     
 0.792
Zgrf1
Zinc finger, GRF-type containing 1.
    
 0.755
ENSMSIP00000014593
annotation not available
     
 0.741
Smg5
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans).
     
 0.741
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.