Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000004641annotation not available (223 aa)    
Predicted Functional Partners:
Pappa
Pregnancy-associated plasma protein A.
    
 
 0.867
Ypel5
Yippee like 5.
   
 0.762
Rmnd5a
Required for meiotic nuclear division 5 homolog A.
    
   0.760
Tnn
Tenascin N.
    
  0.734
Atp6v1h
ATPase, H+ transporting, lysosomal V1 subunit H.
    
   0.722
Epx
Eosinophil peroxidase.
   
 
 0.707
Pappa2
Pappalysin 2.
    
 
 0.685
ENSMSIP00000001099
annotation not available
    
  0.682
Tnr
Tenascin R.
    
  0.682
Tnc
Tenascin C.
    
  0.682
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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