STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kctd5Potassium channel tetramerisation domain containing 5. (234 aa)    
Predicted Functional Partners:
Cul3
Cullin 3.
    
 0.996
Cul1
Cullin 1.
    
 0.973
Kctd2
Potassium channel tetramerisation domain containing 2.
  
 
0.966
ENSMSIP00000033772
annotation not available
    
 0.964
ENSMSIP00000024975
annotation not available
  
 
0.939
Kctd13
Potassium channel tetramerisation domain containing 13.
     
0.909
Rbx1
Ring-box 1.
    
 0.908
Klhl41
Kelch-like 41.
    
 0.890
Klhl13
Kelch-like 13.
    
 0.884
Gan
Giant axonal neuropathy.
    
  0.878
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.