Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Yif1aYip1 interacting factor homolog A (S. cerevisiae). (293 aa)    
Predicted Functional Partners:
Yif1b
Yip1 interacting factor homolog B (S. cerevisiae).
   
   0.944
Yipf5
Yip1 domain family, member 5.
   
 
 0.933
Yipf7
Yip1 domain family, member 7.
   
 
 0.933
Rabac1
Rab acceptor 1 (prenylated).
   
 
 0.902
Yipf4
Yip1 domain family, member 4.
   
 
 0.867
Selenos
Selenoprotein S.
   
 
 0.845
Maea
Macrophage erythroblast attacher.
   
 
 0.844
Vapa
Vesicle-associated membrane protein, associated protein A.
    
 
 0.806
Rab1a
RAB1A, member RAS oncogene family.
   
 
 0.797
Rab1b
RAB1B, member RAS oncogene family.
   
 
 0.795
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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