Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sec23aSEC23 homolog A, COPII coat complex component. (765 aa)    
Predicted Functional Partners:
Sec24d
Sec24 related gene family, member D (S. cerevisiae).
   
0.994
Sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.994
ENSMSIP00000009158
annotation not available
   
0.993
Sec24b
Sec24 related gene family, member B (S. cerevisiae).
   
0.990
Sec31b
Sec31 homolog B (S. cerevisiae).
   
 0.989
Sec31a
Sec31 homolog A (S. cerevisiae).
   
 0.988
Sec24a
Sec24 related gene family, member A (S. cerevisiae).
   
0.987
Sec16a
SEC16 homolog A, endoplasmic reticulum export factor.
   
 0.962
Sar1b
Secretion associated Ras related GTPase 1B.
    
 0.961
Sar1a
Secretion associated Ras related GTPase 1A.
    
 0.953
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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