STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc17a5Solute carrier family 17 (anion/sugar transporter), member 5. (495 aa)    
Predicted Functional Partners:
St6galnac4
annotation not available
      
 0.823
Slc18a3
Solute carrier family 18 (vesicular monoamine), member 3.
     
 0.765
Slc32a1
Solute carrier family 32 (GABA vesicular transporter), member 1.
   
 
 0.751
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.723
Lgals8
Lectin, galactose binding, soluble 8.
    
   0.664
Lgals12
Lectin, galactose binding, soluble 12.
    
   0.664
St3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
      
 0.658
Snap25
Synaptosomal-associated protein 25.
    
 0.623
ENSMSIP00000010782
annotation not available
     
 0.617
Syt2
Synaptotagmin II.
   
 
 0.607
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.