Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sytl2Synaptotagmin-like 2. (950 aa)    
Predicted Functional Partners:
Rab27a
RAB27A, member RAS oncogene family.
    
 0.996
ENSMSIP00000037046
annotation not available
    
 0.993
Myh10
Myosin, heavy polypeptide 10, non-muscle.
    
   0.873
Myo5a
Myosin VA.
    
 0.823
Myrip
Myosin VIIA and Rab interacting protein.
     
 0.785
Lhfpl2
Lipoma HMGIC fusion partner-like 2.
     
 0.742
Myo5b
Myosin VB.
    
 0.691
Myh9
Myosin, heavy polypeptide 9, non-muscle.
    
 
 0.680
Myh11
Myosin, heavy polypeptide 11, smooth muscle.
    
   0.679
Itsn2
Intersectin 2.
     
 0.668
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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