Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Hivep1Human immunodeficiency virus type I enhancer binding protein 1. (2712 aa)    
Predicted Functional Partners:
Btrc
Beta-transducin repeat containing protein.
    
  0.942
Fbxw11
F-box and WD-40 domain protein 11.
    
  0.930
Atxn1
Ataxin 1.
    
   0.770
Rora
RAR-related orphan receptor alpha.
    
 
 0.743
ENSMSIP00000008071
annotation not available
    
  0.731
ENSMSIP00000022664
annotation not available
    
  0.731
Phactr1
Phosphatase and actin regulator 1.
    
 
 0.714
Ak9
Adenylate kinase 9.
    
  0.694
Rfx3
Regulatory factor X, 3 (influences HLA class II expression).
    
 
 0.667
Gfod1
Glucose-fructose oxidoreductase domain containing 1.
    
 
 0.639
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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