Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000005015annotation not available (1252 aa)    
Predicted Functional Partners:
Rrbp1
Ribosome binding protein 1.
   
 0.919
ENSMSIP00000033938
annotation not available
   
   0.820
ENSMSIP00000036092
annotation not available
   
   0.820
Nudcd1
NudC domain containing 1.
    
   0.788
Eif2s2
Eukaryotic translation initiation factor 2, subunit 2 (beta).
   
   0.771
Cluh
Clustered mitochondria (cluA/CLU1) homolog.
   
   0.749
Ddost
Dolichyl-di-phosphooligosaccharide-protein glycotransferase.
   
   0.741
ENSMSIP00000004584
annotation not available
   
   0.739
Dnajc2
DnaJ heat shock protein family (Hsp40) member C2.
   
   0.739
Zfp598
Zinc finger protein 598.
    
 
 0.732
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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