Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Larp4La ribonucleoprotein domain family, member 4. (720 aa)    
Predicted Functional Partners:
ENSMSIP00000016465
annotation not available
    
   0.832
Rack1
Receptor for activated C kinase 1.
    
 
 0.808
ENSMSIP00000001297
annotation not available
    
 
 0.808
ENSMSIP00000023635
annotation not available
    
 
 0.808
Larp4b
La ribonucleoprotein domain family, member 4B.
   
 
 0.801
Atxn2
Ataxin 2.
   
 
 0.779
Hectd1
HECT domain E3 ubiquitin protein ligase 1.
   
   0.750
Flnb
Filamin, beta.
    
   0.737
Flnc
Filamin C, gamma.
    
   0.737
Helz
Helicase with zinc finger domain.
    
   0.713
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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