STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nipsnap2Nipsnap homolog 2. (281 aa)    
Predicted Functional Partners:
Rab40c
Rab40C, member RAS oncogene family.
   
 
  0.875
Mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.874
ENSMSIP00000020279
annotation not available
   
  
 0.870
Wdr6
WD repeat domain 6.
   
    0.864
Psmd1
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1.
   
    0.864
Utp15
UTP15 small subunit processome component.
   
    0.864
Npas4
Neuronal PAS domain protein 4.
   
    0.863
Nop56
NOP56 ribonucleoprotein.
   
    0.863
Asf1b
Anti-silencing function 1B histone chaperone.
   
    0.811
Smc1a
Structural maintenance of chromosomes 1A.
   
    0.811
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.