STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clip3CAP-GLY domain containing linker protein 3. (547 aa)    
Predicted Functional Partners:
Cyld
CYLD lysine 63 deubiquitinase.
    
 0.954
Mapre3
Microtubule-associated protein, RP/EB family, member 3.
    
 
 0.805
Mapre1
Microtubule-associated protein, RP/EB family, member 1.
    
 
 0.805
Mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.805
Dctn2
Dynactin 2.
    
 0.750
Ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1.
    
  0.649
Tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
  0.649
Bub3
BUB3 mitotic checkpoint protein.
    
 0.617
Ckap5
Cytoskeleton associated protein 5.
    
 
 0.608
Xiap
X-linked inhibitor of apoptosis.
    
  0.601
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.