STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Megf11Multiple EGF-like-domains 11. (1138 aa)    
Predicted Functional Partners:
Gulp1
GULP, engulfment adaptor PTB domain containing 1.
   
 0.979
Lama4
Laminin, alpha 4.
    
  0.929
Rhbdf1
Rhomboid 5 homolog 1.
   
  
 0.873
C1qb
Complement component 1, q subcomponent, beta polypeptide.
   
 
 0.870
C1qa
Complement component 1, q subcomponent, alpha polypeptide.
   
 
  0.857
C1qc
Complement component 1, q subcomponent, C chain.
   
 
  0.855
Megf10
Multiple EGF-like-domains 10.
     
  0.855
Wscd2
WSC domain containing 2.
    
 0.849
Cntn3
Contactin 3.
   
  
 0.834
Mpzl3
Myelin protein zero-like 3.
      
 0.821
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.