Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000005152annotation not available (216 aa)    
Predicted Functional Partners:
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.982
Eea1
Early endosome antigen 1.
    
 0.978
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.973
Vps18
VPS18 CORVET/HOPS core subunit.
    
 0.967
Vps16
VSP16 CORVET/HOPS core subunit.
    
 0.965
Tgfbrap1
Transforming growth factor, beta receptor associated protein 1.
    
 0.955
Vps11
VPS11, CORVET/HOPS core subunit.
    
 0.954
Rbsn
Rabenosyn, RAB effector.
    
 0.947
Vps33a
VPS33A CORVET/HOPS core subunit.
    
 0.942
Vps8
VPS8 CORVET complex subunit.
    
 0.933
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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