Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000005216annotation not available (347 aa)    
Predicted Functional Partners:
Lamc2
Laminin, gamma 2.
   
 0.983
Itga6
Integrin alpha 6.
    
 0.982
Lamb3
Laminin, beta 3.
   
 0.980
Lamc1
Laminin, gamma 1.
   
 0.962
Itgb1
Integrin beta 1 (fibronectin receptor beta).
    
 0.959
Itga7
Integrin alpha 7.
    
 0.959
Itgb4
Integrin beta 4.
   
 0.957
Itga3
Integrin alpha 3.
   
 0.943
ENSMSIP00000023277
annotation not available
   
 0.940
Dag1
Dystroglycan 1.
    
 0.916
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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