STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scand1SCAN domain-containing 1. (142 aa)    
Predicted Functional Partners:
Pgbd1
piggyBac transposable element derived 1.
    
   0.788
Zkscan6
Zinc finger with KRAB and SCAN domains 6.
    
  
0.738
Ak9
Adenylate kinase 9.
    
  0.658
ENSMSIP00000015817
annotation not available
    
 
 0.587
Zfp202
Zinc finger protein 202.
    
  
0.578
Zscan18
Zinc finger and SCAN domain containing 18.
    
 
0.547
Rabac1
Rab acceptor 1 (prenylated).
   
  
 0.545
Ssna1
SS nuclear autoantigen 1.
      
 0.545
Drap1
Dr1 associated protein 1 (negative cofactor 2 alpha).
    
 
 0.542
Tlnrd1
Talin rod domain containing 1.
      
 0.532
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.