STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc23Tetratricopeptide repeat domain 23. (488 aa)    
Predicted Functional Partners:
Iqce
IQ motif containing E.
    
 
 0.816
Efcab7
EF-hand calcium binding domain 7.
    
 
 0.553
Snapc1
Small nuclear RNA activating complex, polypeptide 1.
      
 0.548
Trappc11
Trafficking protein particle complex 11.
      
 0.548
Slc25a48
Solute carrier family 25, member 48.
      
 0.547
Ddit4l
DNA-damage-inducible transcript 4-like.
      
 0.535
Adgre4
Adhesion G protein-coupled receptor E4.
      
 0.527
Draxin
Dorsal inhibitory axon guidance protein.
      
 0.497
Rap1gds1
RAP1, GTP-GDP dissociation stimulator 1.
      
 0.491
ENSMSIP00000022514
annotation not available
      
 0.483
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.