STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rag2Recombination activating gene 2. (527 aa)    
Predicted Functional Partners:
Rag1
Recombination activating 1.
   
 0.999
Tmem232
Transmembrane protein 232.
   
 0.987
Cd4
CD4 antigen.
      
 0.897
Fah
Fumarylacetoacetate hydrolase.
      
 0.887
ENSMSIP00000002609
annotation not available
    
 0.820
ENSMSIP00000016030
annotation not available
    
 0.806
ENSMSIP00000025769
annotation not available
    
 0.806
Ccnt1
Cyclin T1.
      
 0.761
Bche
Butyrylcholinesterase.
      
 0.719
Alb
Albumin.
      
 0.718
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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