Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bbs5Bardet-Biedl syndrome 5 (human). (422 aa)    
Predicted Functional Partners:
Bbs2
Bardet-Biedl syndrome 2 (human).
    
 0.999
Bbs4
Bardet-Biedl syndrome 4 (human).
    
 0.999
Bbs1
Bardet-Biedl syndrome 1 (human).
    
 0.999
Ttc8
Tetratricopeptide repeat domain 8.
  
 
 0.999
Bbs7
Bardet-Biedl syndrome 7 (human).
   
 0.999
Bbs9
Bardet-Biedl syndrome 9 (human).
   
 0.999
Bbip1
BBSome interacting protein 1.
   
 0.989
ENSMSIP00000017145
annotation not available
   
 0.982
ENSMSIP00000025847
annotation not available
   
 0.982
Nme3
NME/NM23 nucleoside diphosphate kinase 3.
    
 
 0.943
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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