STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcsCopper chaperone for superoxide dismutase. (274 aa)    
Predicted Functional Partners:
ENSMSIP00000001268
annotation not available
  
 0.998
Atp7b
ATPase, Cu++ transporting, beta polypeptide.
  
 0.998
Sod3
Superoxide dismutase 3, extracellular.
  
0.975
ENSMSIP00000020903
annotation not available
  
0.974
ENSMSIP00000027322
annotation not available
  
0.974
Tcp1
T-complex protein 1.
   
 
 0.889
Cct2
Chaperonin containing Tcp1, subunit 2 (beta).
     
 0.885
ENSMSIP00000032478
annotation not available
     
 0.882
Cct3
Chaperonin containing Tcp1, subunit 3 (gamma).
     
 0.882
Cct6b
Chaperonin containing Tcp1, subunit 6b (zeta).
     
 0.873
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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