STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam169bFamily with sequence similarity 169, member B. (339 aa)    
Predicted Functional Partners:
Gosr1
Golgi SNAP receptor complex member 1.
   
 0.816
Stx5a
Syntaxin 5A.
    
  0.814
Uso1
USO1 vesicle docking factor.
   
 0.800
Ckap5
Cytoskeleton associated protein 5.
   
 0.757
Tubgcp2
Tubulin, gamma complex associated protein 2.
    
 
 0.756
Tubg2
Tubulin, gamma 2.
    
 0.755
ENSMSIP00000010148
annotation not available
    
 
 0.755
Wdr90
WD repeat domain 90.
    
 0.722
Ift20
Intraflagellar transport 20.
   
 0.683
Rhof
Ras homolog family member F (in filopodia).
    
  0.672
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.